Geoscience Australia Sampling Profile

Metadata

IRI
http://pid.geoscience.gov.au/def/ga-sampling
Title

Geoscience Australia Sampling Profile

Publisher
org:ga
Creator
orcid:0000-0002-8742-7730
Contributor
Date Created

2022-02-18

Date Modified

2022-03-02

Version Iri
gas:0.2
Version Info

0.2

Preferred Namespace Prefix

gas

Description

A simple profile of an OWL representation of the Sampling Features Schema described in clauses 9-11 of ISO 19156:2011 Geographic Information - Observations and Measurements for Samples information and other ontologies, such as Sensor, Observation, Sample, and Actuator (SOSA) for Sampling events and Feature relation.

This profile's Sample modelling is centred on the main elements of the now unsuported SAM-Lite (https://surroundaustralia.github.io/ga-supermodel/sam-lite.html) ontology which is a simple OWL representation of parts of the Sampling Features Schema.

The notion of a 'Site' as a special kind of Sample is present in many standards and ontologies, with the TERN Ontology being the one directly reused here.

Overview Diagrams

Figure 1: The central MaterialSample class and its properties

Classes

Feature Of Interest c

IRI http://www.w3.org/ns/sosa/FeatureOfInterest
Is Defined By sosa:
Description

The thing whose property is being estimated or calculated in the course of an Observation to arrive at a Result, or whose property is being manipulated by an Actuator, or which is being sampled or transformed in an act of Sampling.

Scope Note

There is no direct equivalent to this in SAM Lite with the property equivalent to sosa:hasSampledFeature, samfl:sampledFeature, does not specify a range restriction.

In Range Of sosa:hasSampledFeature op

Procedure c

IRI http://www.w3.org/ns/sosa/Procedure
Is Defined By sosa:
Description

A workflow, protocol, plan, algorithm, or computational method specifying how to make an Observation, create a Sample, or make a change to the state of the world (via an Actuator). A Procedure is re-usable, and might be involved in many Observations, Samplings, or Actuations. It explains the steps to be carried out to arrive at reproducible Results.

Scope Note

The definition for samfl:Process is: Process involved in sampling. This may include specimen retrieval or processing, surveying a spatial sampling feature, excavation to provide access to a sampling feature, or any other process whose outcome is a new sampling feature.

The result of a application of a sampling process is a - new or - transformed sample.

Equivalentclass samfl:Process
In Range Of gas:samplingMethod op

Location c

IRI http://purl.org/dc/terms/Location
Is Defined By dcterms:
Description

A spatial region or named place.

Scope Note

The definition for samfl:Location is:Location, expressed as either a geometry object or feature

samfl:GeometryObject is subclass

w3geo:SpatialThing, geosparql:SpatialObject are subclasses

Equivalentclass samfl:Location
In Range Of

Material Sample c

IRI https://w3id.org/tern/ontologies/tern/MaterialSample
Is Defined By terninfo:tern-ontology
Description

A physical result of a sampling (or subsampling) event.

Scope Note

The different between a MaterialSample and a sosa:Sample is that the MaterialSample has a physical presense and is likely to be retained somewhere other than where it was obtained, e.g. on a shelf, in a building. It may not be retained but was, at least at some point, a physical thing.

Example

A whole organism preserved in a collection. A part of an organism isolated for some purpose. A soil sample. A marine microbial sample.

Sub Class Of sosa:Sample
Equivalentclass samfl:Specimen

Site c

IRI https://w3id.org/tern/ontologies/tern/Site
Is Defined By terninfo:tern-ontology
Description

A location where where observations and samplings occur. This Site class is a subclass of Sample since sites are designed to be representative of an system (which may be an ecosystem, bioregion, geological feature).

Scope Note

This class is taken from the TERN Ontology where it is defined as with reference to ecological monitoring, but there is nothing specifically ecological, apart from the definitional wording, in the class ontology preventing this class from being used for geological sites.

Example

Ausplots Rangelands Site 59858 (Site Name: WAACOO0011)

Sub Class Of sosa:Sample
Equivalentclass samfl:SamplingFeature

Object Properties

current location op

IRI http://pid.geoscience.gov.au/def/ga-sampling/currentLocation
Is Defined By geodef:ga-sampling
Description

The location of a physical specimen. This may be a storage location, such as a shelf in a warehouse or a drawer in a museum.

NOTE If a specimen no longer exists, for example, it was destroyed in connection with an observation act, then the currentLocation should be omitted or carry a suitable null indicator.

Domain gas:Specimen
Range dcterms:Location c

sampling location op

IRI http://pid.geoscience.gov.au/def/ga-sampling/samplingLocation
Is Defined By geodef:ga-sampling
Description

The location from where the specimen was obtained.

NOTE Where a specimen has a relatedSamplingFeature whose location provides an unambiguous location then this attribute is not required. However, if the specific sampling location within the sampledFeature is important, then this attribute supports its description.

Scope Note

This property is related to SOSA via the property chain axiom gas:samplingLocation owl:propertyChainAxiom ( sosa:isResultOf geo:hasGeometry ) which essentially links a sosa:Sample to the location of the sosa:Sampling used to obtain it

Domain gas:Specimen
Range dcterms:Location c

sampling method op

IRI http://pid.geoscience.gov.au/def/ga-sampling/samplingMethod
Is Defined By geodef:ga-sampling
Description

Process used to obtain the Specimen from its sampledFeature

Domain gas:Specimen
Range sosa:Procedure c

has sampled feature op

IRI http://www.w3.org/ns/sosa/hasSampledFeature
Is Defined By sosa:
Description

Link to the ultimate feature of interest of the context sample - i.e. the end of a chain of isSampleOf relations

Scope Note

See not in sosa:isSampleOf

Domain sosa:Sample
Range sosa:FeatureOfInterest c

Datatype Properties

sampling time dp

IRI http://pid.geoscience.gov.au/def/ga-sampling/samplingTime
Is Defined By geodef:ga-sampling
Description

When the specimen was retrieved from the sampled feature.

Scope Note

This property is related to SOSA via the property chain axiom gas:samplingLocation owl:propertyChainAxiom ( sosa:isResultOf sosa:resultTime ) which essentially links a sosa:Sample to the time of the sosa:Sampling used to obtain it

Domain gas:Specimen
Range xsd:dateTimeStamp c or xsd:date c or xsd:dateTime c
xsd:date c xsd:dateTime c xsd:dateTimeStamp c

Functional Properties

is sample of fp

IRI http://www.w3.org/ns/sosa/isSampleOf
Is Defined By sosa:
Description

Relation from a Sample to the FeatureOfInterest that it is intended to be representative of.

Scope Note

The definition for samfl:sampledFeature is: A sampling feature is established in order to make observations concerning some domain feature. The association Intention shall link the SF_SamplingFeature to the feature which the sampling feature was designed to sample. The target of this association has the role sampledFeature with respect to the sampling feature, and shall not be a sampling feature or observation. It is usually a real-world feature from an application domain (Figures 5 and 10).

EXAMPLE A profile typically samples a water- or atmospheric-column; a well samples the water in an aquifer; a tissue specimen samples a part of an organism.

NOTE: In this ontology sosa:isSampleOf is expecte to link Samples to other Samples which, relative to the domain are Features of Interested but may be defined only as Samples themselves. For direct links from a Sample to an onject only declared as a Feature of Interest, sosa:hasSampledFeature should be used.

Domain sosa:Sample
Range sosa:Sample

Namespaces

dcterms
http://purl.org/dc/terms/
gas
http://pid.geoscience.gov.au/def/ga-sampling/
geodef
http://pid.geoscience.gov.au/def/
org
https://linked.data.gov.au/org/
orcid
http://orcid.org/
terninfo
https://linkeddata.tern.org.au/information-models/
owl
http://www.w3.org/2002/07/owl#
prov
http://www.w3.org/ns/prov#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
samfl
http://def.seegrid.csiro.au/ontology/om/sam-lite#
sdo
http://schema.org/
skos
http://www.w3.org/2004/02/skos/core#
sosa
http://www.w3.org/ns/sosa/
tern
https://w3id.org/tern/ontologies/tern/
vann
http://purl.org/vocab/vann/
xsd
http://www.w3.org/2001/XMLSchema#

Legend

c Classes
op Object Properties
dp Datatype Properties
fp Functional Properties

made by p y LODE 3.0.2a

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